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nf-corePipeline release! nf-core/hlatyping v2.1.0 - 2.1.0 - Chewbacca!Please see the changelog: <a href="https://github.com/nf-core/hlatyping/releases/tag/2.1.0" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://github.com/nf-core/hlatyping/releases/tag/2.1.0</a><a href="https://mstdn.science/tags/dna" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#dna</a> <a href="https://mstdn.science/tags/hla" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#hla</a> <a href="https://mstdn.science/tags/hlatyping" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#hlatyping</a> <a href="https://mstdn.science/tags/immunology" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#immunology</a> <a href="https://mstdn.science/tags/optitype" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#optitype</a> <a href="https://mstdn.science/tags/personalizedmedicine" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#personalizedmedicine</a> <a href="https://mstdn.science/tags/rna" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#rna</a> <a href="https://mstdn.science/tags/nfcore" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#nfcore</a> <a href="https://mstdn.science/tags/openscience" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#openscience</a> <a href="https://mstdn.science/tags/nextflow" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#nextflow</a> <a href="https://mstdn.science/tags/bioinformatics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#bioinformatics</a>

nf-corePipeline release! nf-core/fastquorum v1.2.0 - 1.2.0!Please see the changelog: <a href="https://github.com/nf-core/fastquorum/releases/tag/1.2.0" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://github.com/nf-core/fastquorum/releases/tag/1.2.0</a> <a href="https://mstdn.science/tags/nfcore" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#nfcore</a> <a href="https://mstdn.science/tags/openscience" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#openscience</a> <a href="https://mstdn.science/tags/nextflow" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#nextflow</a> <a href="https://mstdn.science/tags/bioinformatics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#bioinformatics</a>

nf-corePipeline release! nf-core/oncoanalyser v2.0.0 - 2.0.0 - Flame Robin!Please see the changelog: <a href="https://github.com/nf-core/oncoanalyser/releases/tag/2.0.0" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://github.com/nf-core/oncoanalyser/releases/tag/2.0.0</a><a href="https://mstdn.science/tags/cancer" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#cancer</a> <a href="https://mstdn.science/tags/clinical" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#clinical</a> <a href="https://mstdn.science/tags/dna" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#dna</a> <a href="https://mstdn.science/tags/exome" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#exome</a> <a href="https://mstdn.science/tags/ngs" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#ngs</a> <a href="https://mstdn.science/tags/panel" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#panel</a> <a href="https://mstdn.science/tags/rna" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#rna</a> <a href="https://mstdn.science/tags/targeted" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#targeted</a> <a href="https://mstdn.science/tags/wgs" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#wgs</a> <a href="https://mstdn.science/tags/wigits" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#wigits</a> <a href="https://mstdn.science/tags/wts" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#wts</a> <a href="https://mstdn.science/tags/nfcore" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#nfcore</a> <a href="https://mstdn.science/tags/openscience" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#openscience</a> <a href="https://mstdn.science/tags/nextflow" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#nextflow</a> <a href="https://mstdn.science/tags/bioinformatics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#bioinformatics</a>

nf-corePipeline release! nf-core/rnavar v1.1.0 - nf-core/rnavar 1.1.0 - Mighty Milano!Please see the changelog: <a href="https://github.com/nf-core/rnavar/releases/tag/1.1.0" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://github.com/nf-core/rnavar/releases/tag/1.1.0</a><a href="https://mstdn.science/tags/gatk4" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#gatk4</a> <a href="https://mstdn.science/tags/rna" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#rna</a> <a href="https://mstdn.science/tags/rnaseq" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#rnaseq</a> <a href="https://mstdn.science/tags/variantcalling" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#variantcalling</a> <a href="https://mstdn.science/tags/worflow" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#worflow</a> <a href="https://mstdn.science/tags/nfcore" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#nfcore</a> <a href="https://mstdn.science/tags/openscience" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#openscience</a> <a href="https://mstdn.science/tags/nextflow" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#nextflow</a> <a href="https://mstdn.science/tags/bioinformatics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#bioinformatics</a>

nf-corePipeline release! nf-core/ampliseq v2.13.0 - Ampliseq Version 2.13.0!Please see the changelog: <a href="https://github.com/nf-core/ampliseq/releases/tag/2.13.0" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://github.com/nf-core/ampliseq/releases/tag/2.13.0</a><a href="https://mstdn.science/tags/16s" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#16s</a> <a href="https://mstdn.science/tags/18s" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#18s</a> <a href="https://mstdn.science/tags/ampliconsequencing" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#ampliconsequencing</a> <a href="https://mstdn.science/tags/edna" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#edna</a> <a href="https://mstdn.science/tags/illumina" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#illumina</a> <a href="https://mstdn.science/tags/iontorrent" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#iontorrent</a> <a href="https://mstdn.science/tags/its" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#its</a> <a href="https://mstdn.science/tags/metabarcoding" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#metabarcoding</a> <a href="https://mstdn.science/tags/metagenomics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#metagenomics</a> <a href="https://mstdn.science/tags/microbiome" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#microbiome</a> <a href="https://mstdn.science/tags/pacbio" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#pacbio</a> <a href="https://mstdn.science/tags/qiime2" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#qiime2</a> <a href="https://mstdn.science/tags/rrna" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#rrna</a> <a href="https://mstdn.science/tags/taxonomicclassification" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#taxonomicclassification</a> <a href="https://mstdn.science/tags/taxonomicprofiling" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#taxonomicprofiling</a> <a href="https://mstdn.science/tags/nfcore" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#nfcore</a> <a href="https://mstdn.science/tags/openscience" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#openscience</a> <a href="https://mstdn.science/tags/nextflow" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#nextflow</a> <a href="https://mstdn.science/tags/bioinformatics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#bioinformatics</a>

nf-corePipeline release! nf-core/mag v3.4.0 - mag 3.4.0 - Green Gecko!Please see the changelog: <a href="https://github.com/nf-core/mag/releases/tag/3.4.0" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://github.com/nf-core/mag/releases/tag/3.4.0</a><a href="https://mstdn.science/tags/annotation" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#annotation</a> <a href="https://mstdn.science/tags/assembly" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#assembly</a> <a href="https://mstdn.science/tags/binning" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#binning</a> <a href="https://mstdn.science/tags/longreadsequencing" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#longreadsequencing</a> <a href="https://mstdn.science/tags/metagenomes" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#metagenomes</a> <a href="https://mstdn.science/tags/metagenomics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#metagenomics</a> <a href="https://mstdn.science/tags/nanopore" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#nanopore</a> <a href="https://mstdn.science/tags/nanoporesequencing" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#nanoporesequencing</a> <a href="https://mstdn.science/tags/nfcore" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#nfcore</a> <a href="https://mstdn.science/tags/openscience" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#openscience</a> <a href="https://mstdn.science/tags/nextflow" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#nextflow</a> <a href="https://mstdn.science/tags/bioinformatics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#bioinformatics</a>

nf-corePipeline release! nf-core/variantbenchmarking v1.2.0 - 1.2.0 Doubtful Adams!Please see the changelog: <a href="https://github.com/nf-core/variantbenchmarking/releases/tag/1.2.0" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://github.com/nf-core/variantbenchmarking/releases/tag/1.2.0</a><a href="https://mstdn.science/tags/benchmark" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#benchmark</a> <a href="https://mstdn.science/tags/draft" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#draft</a> <a href="https://mstdn.science/tags/structuralvariants" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#structuralvariants</a> <a href="https://mstdn.science/tags/variantcalling" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#variantcalling</a> <a href="https://mstdn.science/tags/nfcore" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#nfcore</a> <a href="https://mstdn.science/tags/openscience" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#openscience</a> <a href="https://mstdn.science/tags/nextflow" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#nextflow</a> <a href="https://mstdn.science/tags/bioinformatics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#bioinformatics</a>

Pierre Lindenbaum<a href="https://genomic.social/tags/nfcore" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#nfcore</a> "For more transparency and easier management of the proposals, all ideas and concepts for new pipelines will instead be submitted as GitHub issues on a new 'proposals' repository:"<a href="https://github.com/nf-core/proposals/issues" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://github.com/nf-core/proposals/issues</a><a href="https://genomic.social/tags/nextflow" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#nextflow</a> <a href="https://genomic.social/tags/nfcore" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#nfcore</a> <a href="https://genomic.social/tags/workflow" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#workflow</a> <a href="https://genomic.social/tags/bioinformatics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#bioinformatics</a>

nf-corePipeline release! nf-core/genomeassembler v1.0.1 - 1.0.1 - Aluminium Pigeon!Please see the changelog: <a href="https://github.com/nf-core/genomeassembler/releases/tag/1.0.1" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://github.com/nf-core/genomeassembler/releases/tag/1.0.1</a><a href="https://mstdn.science/tags/genomeassembly" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#genomeassembly</a> <a href="https://mstdn.science/tags/nfcore" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#nfcore</a> <a href="https://mstdn.science/tags/openscience" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#openscience</a> <a href="https://mstdn.science/tags/nextflow" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#nextflow</a> <a href="https://mstdn.science/tags/bioinformatics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#bioinformatics</a>

nf-corePipeline release! nf-core/scnanoseq v1.1.0 - nf-core/scnanoseq v1.1.0 - Iron Alligator!Please see the changelog: <a href="https://github.com/nf-core/scnanoseq/releases/tag/1.1.0" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://github.com/nf-core/scnanoseq/releases/tag/1.1.0</a><a href="https://mstdn.science/tags/10xgenomics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#10xgenomics</a> <a href="https://mstdn.science/tags/longreadsequencing" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#longreadsequencing</a> <a href="https://mstdn.science/tags/nanopore" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#nanopore</a> <a href="https://mstdn.science/tags/scrnaseq" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#scrnaseq</a> <a href="https://mstdn.science/tags/singlecell" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#singlecell</a> <a href="https://mstdn.science/tags/nfcore" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#nfcore</a> <a href="https://mstdn.science/tags/openscience" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#openscience</a> <a href="https://mstdn.science/tags/nextflow" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#nextflow</a> <a href="https://mstdn.science/tags/bioinformatics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#bioinformatics</a>

nf-corePipeline release! nf-core/metatdenovo v1.1.1 - nf-core/metatdenovo 1.1.1!Please see the changelog: <a href="https://github.com/nf-core/metatdenovo/releases/tag/1.1.1" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://github.com/nf-core/metatdenovo/releases/tag/1.1.1</a><a href="https://mstdn.science/tags/eukaryotes" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#eukaryotes</a> <a href="https://mstdn.science/tags/metagenomics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#metagenomics</a> <a href="https://mstdn.science/tags/metatranscriptomics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#metatranscriptomics</a> <a href="https://mstdn.science/tags/prokaryotes" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#prokaryotes</a> <a href="https://mstdn.science/tags/viruses" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#viruses</a> <a href="https://mstdn.science/tags/nfcore" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#nfcore</a> <a href="https://mstdn.science/tags/openscience" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#openscience</a> <a href="https://mstdn.science/tags/nextflow" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#nextflow</a> <a href="https://mstdn.science/tags/bioinformatics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#bioinformatics</a>

nf-corePipeline release! nf-core/taxprofiler v1.2.3 - v1.2.3 - Bouncy Basenji Patch!Please see the changelog: <a href="https://github.com/nf-core/taxprofiler/releases/tag/1.2.3" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://github.com/nf-core/taxprofiler/releases/tag/1.2.3</a><a href="https://mstdn.science/tags/classification" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#classification</a> <a href="https://mstdn.science/tags/illumina" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#illumina</a> <a href="https://mstdn.science/tags/longreads" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#longreads</a> <a href="https://mstdn.science/tags/metagenomics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#metagenomics</a> <a href="https://mstdn.science/tags/microbiome" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#microbiome</a> <a href="https://mstdn.science/tags/nanopore" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#nanopore</a> <a href="https://mstdn.science/tags/pathogen" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#pathogen</a> <a href="https://mstdn.science/tags/profiling" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#profiling</a> <a href="https://mstdn.science/tags/shotgun" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#shotgun</a> <a href="https://mstdn.science/tags/taxonomicclassification" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#taxonomicclassification</a> <a href="https://mstdn.science/tags/taxonomicprofiling" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#taxonomicprofiling</a> <a href="https://mstdn.science/tags/nfcore" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#nfcore</a> <a href="https://mstdn.science/tags/openscience" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#openscience</a> <a href="https://mstdn.science/tags/nextflow" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#nextflow</a> <a href="https://mstdn.science/tags/bioinformatics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#bioinformatics</a>

nf-corePipeline release! nf-core/scrnaseq v4.0.0 - 4.0.0!Please see the changelog: <a href="https://github.com/nf-core/scrnaseq/releases/tag/4.0.0" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://github.com/nf-core/scrnaseq/releases/tag/4.0.0</a><a href="https://mstdn.science/tags/10xgenomics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#10xgenomics</a> <a href="https://mstdn.science/tags/10xgenomics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#10xgenomics</a> <a href="https://mstdn.science/tags/alevin" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#alevin</a> <a href="https://mstdn.science/tags/bustools" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#bustools</a> <a href="https://mstdn.science/tags/cellranger" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#cellranger</a> <a href="https://mstdn.science/tags/kallisto" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#kallisto</a> <a href="https://mstdn.science/tags/rnaseq" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#rnaseq</a> <a href="https://mstdn.science/tags/singlecell" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#singlecell</a> <a href="https://mstdn.science/tags/starsolo" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#starsolo</a> <a href="https://mstdn.science/tags/nfcore" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#nfcore</a> <a href="https://mstdn.science/tags/openscience" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#openscience</a> <a href="https://mstdn.science/tags/nextflow" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#nextflow</a> <a href="https://mstdn.science/tags/bioinformatics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#bioinformatics</a>

nf-corePipeline release! nf-core/variantbenchmarking v1.1.0 - 1.1.0 Dark Murakami!Please see the changelog: <a href="https://github.com/nf-core/variantbenchmarking/releases/tag/1.1.0" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://github.com/nf-core/variantbenchmarking/releases/tag/1.1.0</a><a href="https://mstdn.science/tags/benchmark" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#benchmark</a> <a href="https://mstdn.science/tags/draft" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#draft</a> <a href="https://mstdn.science/tags/structuralvariants" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#structuralvariants</a> <a href="https://mstdn.science/tags/variantcalling" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#variantcalling</a> <a href="https://mstdn.science/tags/nfcore" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#nfcore</a> <a href="https://mstdn.science/tags/openscience" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#openscience</a> <a href="https://mstdn.science/tags/nextflow" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#nextflow</a> <a href="https://mstdn.science/tags/bioinformatics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#bioinformatics</a>

nf-corePipeline release! nf-core/genomeassembler v1.0.0 - 1.0.0 - Lead Pigeon!Please see the changelog: <a href="https://github.com/nf-core/genomeassembler/releases/tag/1.0.0" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://github.com/nf-core/genomeassembler/releases/tag/1.0.0</a> <a href="https://mstdn.science/tags/nfcore" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#nfcore</a> <a href="https://mstdn.science/tags/openscience" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#openscience</a> <a href="https://mstdn.science/tags/nextflow" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#nextflow</a> <a href="https://mstdn.science/tags/bioinformatics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#bioinformatics</a>

nf-corePipeline release! nf-core/pacvar v1.0.1 - v1.0.1 - Sardine [3/6/2025]!Please see the changelog: <a href="https://github.com/nf-core/pacvar/releases/tag/1.0.1" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://github.com/nf-core/pacvar/releases/tag/1.0.1</a><a href="https://mstdn.science/tags/alignment" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#alignment</a> <a href="https://mstdn.science/tags/longread" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#longread</a> <a href="https://mstdn.science/tags/pacbio" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#pacbio</a> <a href="https://mstdn.science/tags/puretarget" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#puretarget</a> <a href="https://mstdn.science/tags/variantcalling" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#variantcalling</a> <a href="https://mstdn.science/tags/wgs" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#wgs</a> <a href="https://mstdn.science/tags/nfcore" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#nfcore</a> <a href="https://mstdn.science/tags/openscience" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#openscience</a> <a href="https://mstdn.science/tags/nextflow" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#nextflow</a> <a href="https://mstdn.science/tags/bioinformatics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#bioinformatics</a>

nf-corePipeline release! nf-core/molkart v1.1.0 - 1.1.0 - Resolution Road!Please see the changelog: <a href="https://github.com/nf-core/molkart/releases/tag/1.1.0" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://github.com/nf-core/molkart/releases/tag/1.1.0</a><a href="https://mstdn.science/tags/fish" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#fish</a> <a href="https://mstdn.science/tags/imageprocessing" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#imageprocessing</a> <a href="https://mstdn.science/tags/imaging" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#imaging</a> <a href="https://mstdn.science/tags/molecularcartography" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#molecularcartography</a> <a href="https://mstdn.science/tags/segmentation" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#segmentation</a> <a href="https://mstdn.science/tags/singlecell" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#singlecell</a> <a href="https://mstdn.science/tags/spatial" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#spatial</a> <a href="https://mstdn.science/tags/transcriptomics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#transcriptomics</a> <a href="https://mstdn.science/tags/nfcore" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#nfcore</a> <a href="https://mstdn.science/tags/openscience" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#openscience</a> <a href="https://mstdn.science/tags/nextflow" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#nextflow</a> <a href="https://mstdn.science/tags/bioinformatics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#bioinformatics</a>

nf-corePipeline release! nf-core/funcscan v2.1.0 - v2.1.0 - Egyptian Koshari - 2025-03-05!Please see the changelog: <a href="https://github.com/nf-core/funcscan/releases/tag/2.1.0" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://github.com/nf-core/funcscan/releases/tag/2.1.0</a><a href="https://mstdn.science/tags/amp" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#amp</a> <a href="https://mstdn.science/tags/amr" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#amr</a> <a href="https://mstdn.science/tags/antibioticresistance" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#antibioticresistance</a> <a href="https://mstdn.science/tags/antimicrobialpeptides" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#antimicrobialpeptides</a> <a href="https://mstdn.science/tags/antimicrobialresistancegenes" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#antimicrobialresistancegenes</a> <a href="https://mstdn.science/tags/arg" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#arg</a> <a href="https://mstdn.science/tags/assembly" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#assembly</a> <a href="https://mstdn.science/tags/bgc" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#bgc</a> <a href="https://mstdn.science/tags/biosyntheticgeneclusters" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#biosyntheticgeneclusters</a> <a href="https://mstdn.science/tags/contigs" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#contigs</a> <a href="https://mstdn.science/tags/function" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#function</a> <a href="https://mstdn.science/tags/metagenomics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#metagenomics</a> <a href="https://mstdn.science/tags/naturalproducts" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#naturalproducts</a> <a href="https://mstdn.science/tags/screening" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#screening</a> <a href="https://mstdn.science/tags/secondarymetabolites" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#secondarymetabolites</a> <a href="https://mstdn.science/tags/nfcore" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#nfcore</a> <a href="https://mstdn.science/tags/openscience" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#openscience</a> <a href="https://mstdn.science/tags/nextflow" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#nextflow</a> <a href="https://mstdn.science/tags/bioinformatics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#bioinformatics</a>

nf-core⏰ A small reminder about the nf-core survey - thank you to everyone who the >170 people people who have responded so far!✒️ If you've not yet responded, please take 5 minutes to fill in this very short survey to give us feedback on anything nf-core - what's working well, and what's not - for both users and developers!🗣️ We will present a summary of results during the upcoming March hybrid nf-core hackathon!<a href="https://seqera.typeform.com/2025-nf-core" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://seqera.typeform.com/2025-nf-core</a><a href="https://mstdn.science/tags/nextflow" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#nextflow</a> <a href="https://mstdn.science/tags/nfcore" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#nfcore</a> <a href="https://mstdn.science/tags/bioinformatics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#bioinformatics</a>

nf-corePipeline release! nf-core/metatdenovo v1.1.0 - Nf-core/metatdenovo 1.1.0!Please see the changelog: <a href="https://github.com/nf-core/metatdenovo/releases/tag/1.1.0" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://github.com/nf-core/metatdenovo/releases/tag/1.1.0</a><a href="https://mstdn.science/tags/eukaryotes" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#eukaryotes</a> <a href="https://mstdn.science/tags/metagenomics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#metagenomics</a> <a href="https://mstdn.science/tags/metatranscriptomics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#metatranscriptomics</a> <a href="https://mstdn.science/tags/prokaryotes" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#prokaryotes</a> <a href="https://mstdn.science/tags/viruses" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#viruses</a> <a href="https://mstdn.science/tags/nfcore" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#nfcore</a> <a href="https://mstdn.science/tags/openscience" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#openscience</a> <a href="https://mstdn.science/tags/nextflow" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#nextflow</a> <a href="https://mstdn.science/tags/bioinformatics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#bioinformatics</a>

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