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WikiPathways<p>October 2024 WikiPathways update: 167 edits by 4 contributors and 2 new pathways in the last month. Accessible via <a href="https://fosstodon.org/tags/webservices" class="mention hashtag" rel="tag">#<span>webservices</span></a>, <a href="https://fosstodon.org/tags/rstats" class="mention hashtag" rel="tag">#<span>rstats</span></a>, <a href="https://fosstodon.org/tags/pathvisio" class="mention hashtag" rel="tag">#<span>pathvisio</span></a> and <a href="https://fosstodon.org/tags/Cytoscape" class="mention hashtag" rel="tag">#<span>Cytoscape</span></a> Supported by <a href="https://fosstodon.org/tags/AWSOpen" class="mention hashtag" rel="tag">#<span>AWSOpen</span></a> </p><p><a href="https://wikipathways.org/index.php/Download_Pathways" target="_blank" rel="nofollow noopener" translate="no"><span class="invisible">https://</span><span class="ellipsis">wikipathways.org/index.php/Dow</span><span class="invisible">nload_Pathways</span></a></p><p><a href="https://fosstodon.org/tags/bioinformatics" class="mention hashtag" rel="tag">#<span>bioinformatics</span></a> <a href="https://fosstodon.org/tags/openscience" class="mention hashtag" rel="tag">#<span>openscience</span></a> <a href="https://fosstodon.org/tags/opensource" class="mention hashtag" rel="tag">#<span>opensource</span></a></p>
WikiPathways<p>September 2024 WikiPathways update: 179 edits by 6 contributors and 4 new pathways in the last month. Accessible via <a href="https://fosstodon.org/tags/webservices" class="mention hashtag" rel="tag">#<span>webservices</span></a>, <a href="https://fosstodon.org/tags/rstats" class="mention hashtag" rel="tag">#<span>rstats</span></a>, <a href="https://fosstodon.org/tags/pathvisio" class="mention hashtag" rel="tag">#<span>pathvisio</span></a> and <a href="https://fosstodon.org/tags/cytoscape" class="mention hashtag" rel="tag">#<span>cytoscape</span></a>. Supported by <a href="https://fosstodon.org/tags/awsopen" class="mention hashtag" rel="tag">#<span>awsopen</span></a> . <a href="https://wikipathways.org/index.php/Download_Pathways" target="_blank" rel="nofollow noopener" translate="no"><span class="invisible">https://</span><span class="ellipsis">wikipathways.org/index.php/Dow</span><span class="invisible">nload_Pathways</span></a> </p><p><a href="https://fosstodon.org/tags/bioinformatics" class="mention hashtag" rel="tag">#<span>bioinformatics</span></a> <a href="https://fosstodon.org/tags/openscience" class="mention hashtag" rel="tag">#<span>openscience</span></a> <a href="https://fosstodon.org/tags/opensource" class="mention hashtag" rel="tag">#<span>opensource</span></a></p>
Egon Willighagen<p>I cannot help but wonder what if we had ported <a href="https://social.edu.nl/tags/PathVisio" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>PathVisio</span></a> on top of <a href="https://social.edu.nl/tags/Bioclipse" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Bioclipse</span></a> when I joined the group in 2012... <a href="https://chem-bla-ics.blogspot.com/2006/07/context-help-in-bioclipse.html" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">chem-bla-ics.blogspot.com/2006</span><span class="invisible">/07/context-help-in-bioclipse.html</span></a></p>
WikiPathways<p>March 2024 WikiPathways release: 542 edits by 9 contributors and 10 new pathways. Accessible via <a href="https://fosstodon.org/tags/webservices" class="mention hashtag" rel="tag">#<span>webservices</span></a> and in <a href="https://fosstodon.org/tags/PathVisio" class="mention hashtag" rel="tag">#<span>PathVisio</span></a>, <a href="https://fosstodon.org/tags/Cytoscape" class="mention hashtag" rel="tag">#<span>Cytoscape</span></a>. Supported by AWSOpen. <a href="https://wikipathways.org/#download" target="_blank" rel="nofollow noopener" translate="no"><span class="invisible">https://</span><span class="">wikipathways.org/#download</span><span class="invisible"></span></a> <a href="https://fosstodon.org/tags/bioinformatics" class="mention hashtag" rel="tag">#<span>bioinformatics</span></a> <a href="https://fosstodon.org/tags/openscience" class="mention hashtag" rel="tag">#<span>openscience</span></a> <a href="https://fosstodon.org/tags/opensource" class="mention hashtag" rel="tag">#<span>opensource</span></a></p>
Egon Willighagen<p>my first <a href="https://social.edu.nl/tags/BioHackEU23" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>BioHackEU23</span></a> result: <a href="https://github.com/BiGCAT-UM/org.pathvisio.io.bioschemas" rel="nofollow noopener" target="_blank"><span class="invisible">https://</span><span class="ellipsis">github.com/BiGCAT-UM/org.pathv</span><span class="invisible">isio.io.bioschemas</span></a> <a href="https://social.edu.nl/tags/pathvisio" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>pathvisio</span></a> <a href="https://social.edu.nl/tags/libGPML" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>libGPML</span></a> <span class="h-card"><a href="https://fosstodon.org/@wikipathways" class="u-url mention" rel="nofollow noopener" target="_blank">@<span>wikipathways</span></a></span></p><p>cc <span class="h-card"><a href="https://mastodon.online/@sneumann" class="u-url mention" rel="nofollow noopener" target="_blank">@<span>sneumann</span></a></span></p>
WikiPathways<p>July 2023 WikiPathways release: 232 edits by 32 contributors and 12 new pathways. Accessible via <a href="https://fosstodon.org/tags/webservices" class="mention hashtag" rel="tag">#<span>webservices</span></a> and in <a href="https://fosstodon.org/tags/PathVisio" class="mention hashtag" rel="tag">#<span>PathVisio</span></a>, <a href="https://fosstodon.org/tags/Cytoscape" class="mention hashtag" rel="tag">#<span>Cytoscape</span></a> Supported by AWSOpen. <a href="https://wikipathways.org/#download" target="_blank" rel="nofollow noopener" translate="no"><span class="invisible">https://</span><span class="">wikipathways.org/#download</span><span class="invisible"></span></a> <a href="https://fosstodon.org/tags/bioinformatics" class="mention hashtag" rel="tag">#<span>bioinformatics</span></a> <a href="https://fosstodon.org/tags/openscience" class="mention hashtag" rel="tag">#<span>openscience</span></a> <a href="https://fosstodon.org/tags/opensource" class="mention hashtag" rel="tag">#<span>opensource</span></a></p>
Egon Willighagen<p>I am attending the 4th <a href="https://akademienl.social/tags/EpiLipidNET" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>EpiLipidNET</span></a> meeting in Toulouse tomorrow and Wednesday. Tomorrow I will demo <span class="h-card"><a href="https://fosstodon.org/@wikipathways" class="u-url mention" rel="nofollow noopener" target="_blank">@<span>wikipathways</span></a></span> <span class="h-card"><a href="https://fosstodon.org/@bridgedb" class="u-url mention" rel="nofollow noopener" target="_blank">@<span>bridgedb</span></a></span> and <a href="https://akademienl.social/tags/pathvisio" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>pathvisio</span></a> and on Wednesday I get to show some of the new things in these projects. I will cover the meeting from this account</p>
WikiPathways<p>June 2023 WikiPathways release: 137 edits by 22 contributors and 2 new pathways. Accessible via <a href="https://fosstodon.org/tags/webservices" class="mention hashtag" rel="tag">#<span>webservices</span></a> and in <a href="https://fosstodon.org/tags/PathVisio" class="mention hashtag" rel="tag">#<span>PathVisio</span></a>, <a href="https://fosstodon.org/tags/Cytoscape" class="mention hashtag" rel="tag">#<span>Cytoscape</span></a> Supported by AWSOpen. <a href="https://wikipathways.org/#download" target="_blank" rel="nofollow noopener" translate="no"><span class="invisible">https://</span><span class="">wikipathways.org/#download</span><span class="invisible"></span></a><br /><a href="https://fosstodon.org/tags/bioinformatics" class="mention hashtag" rel="tag">#<span>bioinformatics</span></a> <a href="https://fosstodon.org/tags/openscience" class="mention hashtag" rel="tag">#<span>openscience</span></a> <a href="https://fosstodon.org/tags/opensource" class="mention hashtag" rel="tag">#<span>opensource</span></a></p>
WikiPathways<p>May 2023 WikiPathways release: 316 edits by 13 contributors and 15 new pathways. Accessible via <a href="https://fosstodon.org/tags/webservices" class="mention hashtag" rel="tag">#<span>webservices</span></a> and in <a href="https://fosstodon.org/tags/PathVisio" class="mention hashtag" rel="tag">#<span>PathVisio</span></a>, <a href="https://fosstodon.org/tags/Cytoscape" class="mention hashtag" rel="tag">#<span>Cytoscape</span></a>. Supported by <a href="https://fosstodon.org/tags/AWSOpen" class="mention hashtag" rel="tag">#<span>AWSOpen</span></a>. <a href="https://www.wikipathways.org/download.html" target="_blank" rel="nofollow noopener" translate="no"><span class="invisible">https://www.</span><span class="">wikipathways.org/download.html</span><span class="invisible"></span></a><br /><a href="https://fosstodon.org/tags/bioinformatics" class="mention hashtag" rel="tag">#<span>bioinformatics</span></a> <a href="https://fosstodon.org/tags/openscience" class="mention hashtag" rel="tag">#<span>openscience</span></a> <a href="https://fosstodon.org/tags/opensource" class="mention hashtag" rel="tag">#<span>opensource</span></a> <a href="https://fosstodon.org/tags/nomoa" class="mention hashtag" rel="tag">#<span>nomoa</span></a></p>
WikiPathways<p>April 2023 WikiPathways release: 276 edits by 32 contributors and 6 new pathways. Accessible via <a href="https://fosstodon.org/tags/webservices" class="mention hashtag" rel="tag">#<span>webservices</span></a> and in <a href="https://fosstodon.org/tags/PathVisio" class="mention hashtag" rel="tag">#<span>PathVisio</span></a>, <a href="https://fosstodon.org/tags/Cytoscape" class="mention hashtag" rel="tag">#<span>Cytoscape</span></a>. Supported by <a href="https://fosstodon.org/tags/AWSOpen" class="mention hashtag" rel="tag">#<span>AWSOpen</span></a>. <a href="https://www.wikipathways.org/download.html" target="_blank" rel="nofollow noopener" translate="no"><span class="invisible">https://www.</span><span class="">wikipathways.org/download.html</span><span class="invisible"></span></a><br /><a href="https://fosstodon.org/tags/bioinformatics" class="mention hashtag" rel="tag">#<span>bioinformatics</span></a> <a href="https://fosstodon.org/tags/openscience" class="mention hashtag" rel="tag">#<span>openscience</span></a> <a href="https://fosstodon.org/tags/opensource" class="mention hashtag" rel="tag">#<span>opensource</span></a> <a href="https://fosstodon.org/tags/nomoa" class="mention hashtag" rel="tag">#<span>nomoa</span></a></p>
WikiPathways<p>A molecular network map of orexin-orexin receptor signaling system. <a href="https://doi.org/10.1007/s12079-022-00700-3" target="_blank" rel="nofollow noopener" translate="no"><span class="invisible">https://</span><span class="ellipsis">doi.org/10.1007/s12079-022-007</span><span class="invisible">00-3</span></a> <a href="https://fosstodon.org/tags/Orexin" class="mention hashtag" rel="tag">#<span>Orexin</span></a> <a href="https://fosstodon.org/tags/Pathvisio" class="mention hashtag" rel="tag">#<span>Pathvisio</span></a> <a href="https://fosstodon.org/tags/Sleep" class="mention hashtag" rel="tag">#<span>Sleep</span></a> <a href="https://fosstodon.org/tags/Feeding" class="mention hashtag" rel="tag">#<span>Feeding</span></a> <a href="https://fosstodon.org/tags/Hypothalamus" class="mention hashtag" rel="tag">#<span>Hypothalamus</span></a></p>
WikiPathways<p>March 2023 WikiPathways release: 293 edits by 30 contributors and 22 new pathways. Accessible via <a href="https://fosstodon.org/tags/webservices" class="mention hashtag" rel="tag">#<span>webservices</span></a> and in <a href="https://fosstodon.org/tags/PathVisio" class="mention hashtag" rel="tag">#<span>PathVisio</span></a>, <a href="https://fosstodon.org/tags/Cytoscape" class="mention hashtag" rel="tag">#<span>Cytoscape</span></a>. Supported by <a href="https://fosstodon.org/tags/AWSOpen" class="mention hashtag" rel="tag">#<span>AWSOpen</span></a>. <a href="https://www.wikipathways.org/download.html" target="_blank" rel="nofollow noopener" translate="no"><span class="invisible">https://www.</span><span class="">wikipathways.org/download.html</span><span class="invisible"></span></a><br /><a href="https://fosstodon.org/tags/bioinformatics" class="mention hashtag" rel="tag">#<span>bioinformatics</span></a> <a href="https://fosstodon.org/tags/openscience" class="mention hashtag" rel="tag">#<span>openscience</span></a> <a href="https://fosstodon.org/tags/opensource" class="mention hashtag" rel="tag">#<span>opensource</span></a> <a href="https://fosstodon.org/tags/nomoa" class="mention hashtag" rel="tag">#<span>nomoa</span></a></p>
WikiPathways<p>February 2023 WikiPathways release: 283 edits by 32 contributors. Accessible via <a href="https://fosstodon.org/tags/webservices" class="mention hashtag" rel="tag">#<span>webservices</span></a> and in <a href="https://fosstodon.org/tags/PathVisio" class="mention hashtag" rel="tag">#<span>PathVisio</span></a>, <a href="https://fosstodon.org/tags/Cytoscape" class="mention hashtag" rel="tag">#<span>Cytoscape</span></a>. Supported by <a href="https://fosstodon.org/tags/AWSOpen" class="mention hashtag" rel="tag">#<span>AWSOpen</span></a>. <a href="https://wikipathways.org/index.php/Download_Pathways" target="_blank" rel="nofollow noopener" translate="no"><span class="invisible">https://</span><span class="ellipsis">wikipathways.org/index.php/Dow</span><span class="invisible">nload_Pathways</span></a><br /><a href="https://fosstodon.org/tags/bioinformatics" class="mention hashtag" rel="tag">#<span>bioinformatics</span></a> <a href="https://fosstodon.org/tags/openscience" class="mention hashtag" rel="tag">#<span>openscience</span></a> <a href="https://fosstodon.org/tags/opensource" class="mention hashtag" rel="tag">#<span>opensource</span></a> <a href="https://fosstodon.org/tags/nomoa" class="mention hashtag" rel="tag">#<span>nomoa</span></a></p>
WikiPathways<p>January 2023 WikiPathways release: 151 edits by 13 contributors and 11 new pathways. Accessible via <a href="https://fosstodon.org/tags/webservices" class="mention hashtag" rel="tag">#<span>webservices</span></a> and in <a href="https://fosstodon.org/tags/PathVisio" class="mention hashtag" rel="tag">#<span>PathVisio</span></a>, <a href="https://fosstodon.org/tags/Cytoscape" class="mention hashtag" rel="tag">#<span>Cytoscape</span></a>. Supported by <a href="https://fosstodon.org/tags/AWSOpen" class="mention hashtag" rel="tag">#<span>AWSOpen</span></a>. <a href="https://wikipathways.org/index.php/Download_Pathways" target="_blank" rel="nofollow noopener" translate="no"><span class="invisible">https://</span><span class="ellipsis">wikipathways.org/index.php/Dow</span><span class="invisible">nload_Pathways</span></a><br /><a href="https://fosstodon.org/tags/bioinformatics" class="mention hashtag" rel="tag">#<span>bioinformatics</span></a> <a href="https://fosstodon.org/tags/openscience" class="mention hashtag" rel="tag">#<span>openscience</span></a> <a href="https://fosstodon.org/tags/opensource" class="mention hashtag" rel="tag">#<span>opensource</span></a> <a href="https://fosstodon.org/tags/nomoa" class="mention hashtag" rel="tag">#<span>nomoa</span></a></p>
WikiPathways<p>December 2022 WikiPathways release: 180 edits by 15 contributors and 1 new pathway. Accessible via <a href="https://fosstodon.org/tags/webservices" class="mention hashtag" rel="tag">#<span>webservices</span></a> and in <a href="https://fosstodon.org/tags/PathVisio" class="mention hashtag" rel="tag">#<span>PathVisio</span></a>, <a href="https://fosstodon.org/tags/Cytoscape" class="mention hashtag" rel="tag">#<span>Cytoscape</span></a>. Supported by <a href="https://fosstodon.org/tags/AWSOpen" class="mention hashtag" rel="tag">#<span>AWSOpen</span></a>. <a href="https://wikipathways.org/index.php/Download_Pathways" target="_blank" rel="nofollow noopener" translate="no"><span class="invisible">https://</span><span class="ellipsis">wikipathways.org/index.php/Dow</span><span class="invisible">nload_Pathways</span></a><br /><a href="https://fosstodon.org/tags/bioinformatics" class="mention hashtag" rel="tag">#<span>bioinformatics</span></a> <a href="https://fosstodon.org/tags/openscience" class="mention hashtag" rel="tag">#<span>openscience</span></a> <a href="https://fosstodon.org/tags/opensource" class="mention hashtag" rel="tag">#<span>opensource</span></a> <a href="https://fosstodon.org/tags/nomoa" class="mention hashtag" rel="tag">#<span>nomoa</span></a></p>
WikiPathways<p>November 2022 WikiPathways release: 201 edits by 22 contributors and 8 new pathways. Accessible via <a href="https://fosstodon.org/tags/webservices" class="mention hashtag" rel="tag">#<span>webservices</span></a> and in <a href="https://fosstodon.org/tags/PathVisio" class="mention hashtag" rel="tag">#<span>PathVisio</span></a>, <a href="https://fosstodon.org/tags/Cytoscape" class="mention hashtag" rel="tag">#<span>Cytoscape</span></a>. Supported by <a href="https://fosstodon.org/tags/AWSOpen" class="mention hashtag" rel="tag">#<span>AWSOpen</span></a>. <a href="https://wikipathways.org/index.php/Download_Pathways" target="_blank" rel="nofollow noopener" translate="no"><span class="invisible">https://</span><span class="ellipsis">wikipathways.org/index.php/Dow</span><span class="invisible">nload_Pathways</span></a><br /><a href="https://fosstodon.org/tags/bioinformatics" class="mention hashtag" rel="tag">#<span>bioinformatics</span></a> <a href="https://fosstodon.org/tags/openscience" class="mention hashtag" rel="tag">#<span>openscience</span></a> <a href="https://fosstodon.org/tags/opensource" class="mention hashtag" rel="tag">#<span>opensource</span></a> <a href="https://fosstodon.org/tags/nomoa" class="mention hashtag" rel="tag">#<span>nomoa</span></a></p>