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#genomics

22 posts16 participants0 posts today
flypapers<p>📰 "Microcephaly-Associated Genes asp and Sas4 Control Chromatin Organization and Nuclear Lamina Structure in Drosophila melanogaster"<br><a href="https://www.biorxiv.org/content/10.1101/2025.07.22.666102v1?rss=1" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://www.</span><span class="ellipsis">biorxiv.org/content/10.1101/20</span><span class="invisible">25.07.22.666102v1?rss=1</span></a><br> <a href="https://biologists.social/tags/DrosophilaMelanogaster" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>DrosophilaMelanogaster</span></a><br> <a href="https://biologists.social/tags/Drosophila" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Drosophila</span></a> <a href="https://biologists.social/tags/Genomics" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Genomics</span></a></p>
flypapers<p>📰 "Revised evolutionary relationships within Brachycera and the early origin of bicoid in flies"<br><a href="https://www.biorxiv.org/content/10.1101/2025.07.22.666104v1?rss=1" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://www.</span><span class="ellipsis">biorxiv.org/content/10.1101/20</span><span class="invisible">25.07.22.666104v1?rss=1</span></a><br> <a href="https://biologists.social/tags/DrosophilaMelanogaster" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>DrosophilaMelanogaster</span></a><br> <a href="https://biologists.social/tags/Evolution" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Evolution</span></a><br> <a href="https://biologists.social/tags/Drosophila" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Drosophila</span></a> <a href="https://biologists.social/tags/Genomics" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Genomics</span></a> <a href="https://biologists.social/tags/Embryo" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Embryo</span></a></p>
flypapers<p>📰 "Gene model for the ortholog of Glyp in Drosophila ananassae"<br><a href="https://www.biorxiv.org/content/10.1101/2025.07.18.665411v1?rss=1" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://www.</span><span class="ellipsis">biorxiv.org/content/10.1101/20</span><span class="invisible">25.07.18.665411v1?rss=1</span></a><br> <a href="https://biologists.social/tags/Drosophila" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Drosophila</span></a> <a href="https://biologists.social/tags/Evolution" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Evolution</span></a><br> <a href="https://biologists.social/tags/Genomics" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Genomics</span></a></p>
Genomics Daily 🧬🤖<p>🧬 Arab pangenome breakthrough: 111.96M base pairs unveil genetic diversity &amp; precision medicine potential! 🔬 Genomic game-changer for population health 🚀 <a href="https://genomic.social/tags/Genomics" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Genomics</span></a> <a href="https://genomic.social/tags/PrecisionMedicine" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>PrecisionMedicine</span></a> <a href="https://genomic.social/tags/ArabHealth" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ArabHealth</span></a> <a href="https://emmecola.github.io/genomics-daily" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">emmecola.github.io/genomics-da</span><span class="invisible">ily</span></a></p>
flypapers<p>📰 "Huntingtin preserves mitochondrial genome integrity in neurons, which is impaired in Huntingtons disease"<br><a href="https://www.biorxiv.org/content/10.1101/2025.07.24.666629v1?rss=1" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://www.</span><span class="ellipsis">biorxiv.org/content/10.1101/20</span><span class="invisible">25.07.24.666629v1?rss=1</span></a><br> <a href="https://biologists.social/tags/Mitochondria" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Mitochondria</span></a> <a href="https://biologists.social/tags/Drosophila" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Drosophila</span></a> <a href="https://biologists.social/tags/Genomics" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Genomics</span></a></p>
flypapers<p>📰 "Gene model for the ortholog of Pi3K21B in Drosophila eugracilis"<br><a href="https://www.biorxiv.org/content/10.1101/2025.07.21.665947v1?rss=1" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://www.</span><span class="ellipsis">biorxiv.org/content/10.1101/20</span><span class="invisible">25.07.21.665947v1?rss=1</span></a><br> <a href="https://biologists.social/tags/Drosophila" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Drosophila</span></a> <a href="https://biologists.social/tags/Evolution" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Evolution</span></a><br> <a href="https://biologists.social/tags/Genomics" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Genomics</span></a></p>
Dave Lunt<p>I’m currently trying to workflow together all my DNA sequence cleaning and munging as although each issue is rare there’s ALWAYS some problem. The goal is automatically creating clean and well behaved sequence data. Though there may always be a novel problem waiting to say hello! <a href="https://genomic.social/tags/bioinformatics" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>bioinformatics</span></a> <a href="https://genomic.social/tags/genomics" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>genomics</span></a></p>
flypapers<p>📰 "The Illusion of Polygenicity in Poolseq studies: Insufficient Power Can Mask Simple Genetic Architectures"<br><a href="https://www.biorxiv.org/content/10.1101/2025.07.23.666414v1?rss=1" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://www.</span><span class="ellipsis">biorxiv.org/content/10.1101/20</span><span class="invisible">25.07.23.666414v1?rss=1</span></a><br> <a href="https://biologists.social/tags/DrosophilaMelanogaster" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>DrosophilaMelanogaster</span></a><br> <a href="https://biologists.social/tags/Drosophila" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Drosophila</span></a> <a href="https://biologists.social/tags/Genomics" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Genomics</span></a> <a href="https://biologists.social/tags/Larva" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Larva</span></a></p>
Luke Pembleton<p>Anyone here using opentrons lab automation robots for plant based <a href="https://genomic.social/tags/genomics" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>genomics</span></a> work? Or other robotic setups?</p>
flypapers<p>📰 "Genomic response to sex-separated gene pools"<br><a href="https://www.biorxiv.org/content/10.1101/2025.07.18.665591v1?rss=1" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://www.</span><span class="ellipsis">biorxiv.org/content/10.1101/20</span><span class="invisible">25.07.18.665591v1?rss=1</span></a><br> <a href="https://biologists.social/tags/DrosophilaMelanogaster" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>DrosophilaMelanogaster</span></a><br> <a href="https://biologists.social/tags/Evolution" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Evolution</span></a><br> <a href="https://biologists.social/tags/Drosophila" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Drosophila</span></a> <a href="https://biologists.social/tags/Genomics" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Genomics</span></a></p>
flypapers<p>📰 "Gene model for the ortholog of Glyp in Drosophila pseudoobscura"<br><a href="https://www.biorxiv.org/content/10.1101/2025.07.18.665514v1?rss=1" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://www.</span><span class="ellipsis">biorxiv.org/content/10.1101/20</span><span class="invisible">25.07.18.665514v1?rss=1</span></a><br> <a href="https://biologists.social/tags/Drosophila" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Drosophila</span></a> <a href="https://biologists.social/tags/Evolution" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Evolution</span></a><br> <a href="https://biologists.social/tags/Genomics" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Genomics</span></a></p>
flypapers<p>📰 "A genome-wide association study implicates the olfactory system in Drosophila melanogaster diapause-associated lifespan extension and fecundity"<br><a href="https://doi.org/doi:10.7554/eLife.98142" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="">doi.org/doi:10.7554/eLife.98142</span><span class="invisible"></span></a><br><a href="https://pubmed.ncbi.nlm.nih.gov/40693912/" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">pubmed.ncbi.nlm.nih.gov/406939</span><span class="invisible">12/</span></a><br> <a href="https://biologists.social/tags/DrosophilaMelanogaster" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>DrosophilaMelanogaster</span></a><br> <a href="https://biologists.social/tags/Drosophila" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Drosophila</span></a> <a href="https://biologists.social/tags/Genomics" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Genomics</span></a></p>
Genomics Daily 🧬🤖<p>🧠 ML cracks Alzheimer's genetic code! 6 new loci discovered, revealing hidden disease pathways. Brain science just leveled up 🚀 <a href="https://genomic.social/tags/Genomics" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Genomics</span></a> <a href="https://genomic.social/tags/AIinMedicine" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>AIinMedicine</span></a> <a href="https://genomic.social/tags/AlzheimerResearch" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>AlzheimerResearch</span></a> <a href="https://emmecola.github.io/genomics-daily" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">emmecola.github.io/genomics-da</span><span class="invisible">ily</span></a></p>
Boas Pucker<p>Exciting news: we have our first data publication via bonndata 🥳</p><p>"Genome sequence and annotation of Victoria cruziana"<br><a href="https://doi.org/10.60507/FK2/5DS0JZ" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="">doi.org/10.60507/FK2/5DS0JZ</span><span class="invisible"></span></a></p><p>Please find the corresponding preprint here:<br><a href="https://doi.org/10.1101/2024.06.15.599162" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">doi.org/10.1101/2024.06.15.599</span><span class="invisible">162</span></a></p><p><a href="https://mastodon.social/tags/Genomics" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Genomics</span></a> <a href="https://mastodon.social/tags/PlantSci" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>PlantSci</span></a> <a href="https://mastodon.social/tags/DataScience" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>DataScience</span></a> <span class="h-card" translate="no"><a href="https://genomic.social/@PuckerLab" class="u-url mention" rel="nofollow noopener" target="_blank">@<span>PuckerLab</span></a></span> <span class="h-card" translate="no"><a href="https://mstdn.science/@samnm" class="u-url mention" rel="nofollow noopener" target="_blank">@<span>samnm</span></a></span></p>
Luke Pembleton<p>On NCBI what determines which genome assembly gets the green 'reference" star tag? I'm seeming a scaffold level assembly with 40X coverage from 2019 getting the 'reference' star whilst a complete chromosome scale assembly with 300X coverage from 2021 for the same species not... Is this a community driven label that just takes time to update?<br><a href="https://genomic.social/tags/genomics" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>genomics</span></a> <a href="https://genomic.social/tags/bioinformatics" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>bioinformatics</span></a></p>
GHGA<p>Both projects reflect our commitment to ensuring the people whose data drives genomic research help shape both governance and communication.</p><p><a href="https://genomic.social/tags/Genomics" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Genomics</span></a> <a href="https://genomic.social/tags/PatientInvolvement" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>PatientInvolvement</span></a> <a href="https://genomic.social/tags/DataGovernance" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>DataGovernance</span></a> <a href="https://genomic.social/tags/GHGA" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>GHGA</span></a> <a href="https://genomic.social/tags/PublicEngagement" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>PublicEngagement</span></a></p>
Angus Davison<p>Shout out to Novogene and their Illumina library prep and sequencing skills. I just received 20G of data back from a sample where the DNA was immeasurably low, yet all samples both good and bad processed at the same time. First fig shows normal sample, second fig shows poor sample (extracted from very small feather) <a href="https://ecoevo.social/tags/novogene" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>novogene</span></a> <a href="https://ecoevo.social/tags/genomics" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>genomics</span></a> <a href="https://ecoevo.social/tags/illumina" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>illumina</span></a></p>
United Kingdom News Beep<p>Trends &amp; Strategies Shaping the $3.17 Billion Nutrigenomics</p><p>Dublin, July 21, 2025 (GLOBE NEWSWIRE) — The “Nutrigenomics Market Report by Product, Sample Type, Application, End User,…<br><a href="https://newsbeep.org/tags/NewsBeep" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>NewsBeep</span></a> <a href="https://newsbeep.org/tags/News" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>News</span></a> <a href="https://newsbeep.org/tags/Genetics" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Genetics</span></a> <a href="https://newsbeep.org/tags/GeneticAnalysis" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>GeneticAnalysis</span></a> <a href="https://newsbeep.org/tags/genetictesting" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>genetictesting</span></a> <a href="https://newsbeep.org/tags/GeneticTestingServices" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>GeneticTestingServices</span></a> <a href="https://newsbeep.org/tags/GeneticsTesting" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>GeneticsTesting</span></a> <a href="https://newsbeep.org/tags/Genomics" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Genomics</span></a> <a href="https://newsbeep.org/tags/Nutrigenomics" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Nutrigenomics</span></a> <a href="https://newsbeep.org/tags/ResearchandMarkets" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ResearchandMarkets</span></a> <a href="https://newsbeep.org/tags/Science" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Science</span></a> <a href="https://newsbeep.org/tags/UK" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>UK</span></a> <a href="https://newsbeep.org/tags/UnitedKingdom" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>UnitedKingdom</span></a><br><a href="https://www.newsbeep.com/uk/13702/" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://www.</span><span class="">newsbeep.com/uk/13702/</span><span class="invisible"></span></a></p>
Australia News Beep<p>Trends &amp; Strategies Shaping the $3.17 Billion Nutrigenomics</p><p>Dublin, July 21, 2025 (GLOBE NEWSWIRE) — The “Nutrigenomics Market Report by Product, Sample Type, Application, End User,…<br><a href="https://newsbeep.org/tags/NewsBeep" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>NewsBeep</span></a> <a href="https://newsbeep.org/tags/News" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>News</span></a> <a href="https://newsbeep.org/tags/Genetics" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Genetics</span></a> <a href="https://newsbeep.org/tags/AU" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>AU</span></a> <a href="https://newsbeep.org/tags/Australia" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Australia</span></a> <a href="https://newsbeep.org/tags/GeneticAnalysis" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>GeneticAnalysis</span></a> <a href="https://newsbeep.org/tags/genetictesting" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>genetictesting</span></a> <a href="https://newsbeep.org/tags/GeneticTestingServices" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>GeneticTestingServices</span></a> <a href="https://newsbeep.org/tags/GeneticsTesting" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>GeneticsTesting</span></a> <a href="https://newsbeep.org/tags/Genomics" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Genomics</span></a> <a href="https://newsbeep.org/tags/Nutrigenomics" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Nutrigenomics</span></a> <a href="https://newsbeep.org/tags/ResearchandMarkets" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ResearchandMarkets</span></a> <a href="https://newsbeep.org/tags/Science" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Science</span></a><br><a href="https://www.newsbeep.com/au/11569/" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://www.</span><span class="">newsbeep.com/au/11569/</span><span class="invisible"></span></a></p>
Johannes Köster<p><a href="https://fosstodon.org/tags/vembrane" class="mention hashtag" rel="tag">#<span>vembrane</span></a>, our CLI tool for manipulating VCF/BCF files via Python expressions has gained a new subcommand for sorting. Use it to sort by impact, pathogenicity, frequencies, or any complex Python logic, e.g. for variant prioritization.<br /><a href="https://github.com/vembrane/vembrane/blob/main/docs/sort.md" target="_blank" rel="nofollow noopener" translate="no"><span class="invisible">https://</span><span class="ellipsis">github.com/vembrane/vembrane/b</span><span class="invisible">lob/main/docs/sort.md</span></a><br /><a href="https://fosstodon.org/tags/genomics" class="mention hashtag" rel="tag">#<span>genomics</span></a> <a href="https://fosstodon.org/tags/bioinformatics" class="mention hashtag" rel="tag">#<span>bioinformatics</span></a></p>